Browse of TCMCG017C09309 protein

CDS

Accession Number	TCMCG017C09309
gbkey	CDS
Protein Id	OMP02521.1
Location	join(40794..41746,42511..43246,43835..43995,45316..45337,45993..46202,46299..46430,46716..46915,47322..47526,47635..47940)
GeneID	InterPro:IPR003877
Organism	Corchorus olitorius
locus_tag	COLO4_11028

Protein

Length	974aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215141, BioSample:SAMN03160584
db_source	AWUE01014619.1
Definition	SPla/RYanodine receptor SPRY [Corchorus olitorius]
Locus_tag	COLO4_11028

EGGNOG-MAPPER Annotation

COG_category	O
Description	E3 ubiquitin-protein ligase
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K12169        [VIEW IN KEGG]
EC	2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	-
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004842        [VIEW IN EMBL-EBI] GO:0006464        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009056        [VIEW IN EMBL-EBI] GO:0009057        [VIEW IN EMBL-EBI] GO:0009605        [VIEW IN EMBL-EBI] GO:0009607        [VIEW IN EMBL-EBI] GO:0009615        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016567        [VIEW IN EMBL-EBI] GO:0016740        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019787        [VIEW IN EMBL-EBI] GO:0030163        [VIEW IN EMBL-EBI] GO:0032446        [VIEW IN EMBL-EBI] GO:0036211        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043207        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044267        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051704        [VIEW IN EMBL-EBI] GO:0051707        [VIEW IN EMBL-EBI] GO:0051726        [VIEW IN EMBL-EBI] GO:0060154        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070647        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0098586        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI] GO:1901565        [VIEW IN EMBL-EBI] GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCAGAAGATAGCCTCCGGATTGGTGGGCTTTCTTCTGGTTTGGCTGTGATATTGAACAATGAAGATGGGAAGGAAAATTTGTCGAAAACCCGTCTTGTGTCATCTTGTGATGATTTTGGTCATCAATCTGTGGAGCGTGCTCTTGAATTTGTATTTGGACTTCCAAGTAAATCACTTGATCCATTGAGTGGTCCAATTGATGGCAATCTAATTCGTTCAATTATAAAGAATTACGTGCGCTCAGATTCAGATTCTTTGGTTAGTAGCAGGGATGGGGTGGCTGTTGTTGATAATGGCTCTGGACCCGATGTTGTTGGTCTTGAAGAATTCAGTATCTGTGGTGAAATCAAAATCATTAAGTCACCTTTGCTCTTAGAGAGCTTAGCATTGTTTAGTAGCGCCAGGGCTAATGTCTGTGTTTGGAAAGGGAAATGGATGTATGAAGTAATTTTGGAGACTTCTGGTATACAGCAGCTAGGATGGGCTACTATTTCCTGTCCATTCACTGACCATAAGGGTGTAGGCGATGCTGATGATTCATATGCATTTGATGGCAGAAGAGTTAGCAAATGGAACAAGGAAGCTGAGCCATATGGTCAGTCCTGGGTGGTGGGTGATGTAATTGGATGCTGTATAGACTTGGATCATGATGAGATTTCATTTTATAGGAATGGCGTTGCTCTTGGACTGGCATTCTCTGGCATTCGGAAAATGGGACCTGGATTTGGATATTATCCTGCGGTTTCTCTTTCTCAGGGTGAACGGTGCGAATTGAATTTTGGTGCTCGCCCCTTTAAATACCCAATTGATGGCTACCTTCCTCTTCAATCACCTCCCACCTGTAGCTCTTTTGCAAAGCAATTGCTGGATTGCCTATCTAGGCTGTTGGATATGCAATCTGTCGAGCGAGCTGAGCATTCTTCAGTTGAAAAATTGAGGAGACTGAAGAGGACATTTGTACAAAACCTTTTATTGAAGAACCGAGGAGCTGATCGCAACATGCCACCTCCCGGGACCTCAAGCAATTCTGTTCTTGTTTCTTTGTATACTGTTATCCTCCATTTTCTATCAGAAGGCTTTGGAATGGGGAATATATGTGGGTGGTTGACAAACTGTGATTCAAATGCTCGCGATATTGGTTTTCTTCATCGAGGTGGCCACCAAAGTTTTCCCATAGGTTTGTTTCTGAAGAATGATCCTCATCGAGCTGATATTTCCAGGCTTGGAGGATCATTTAGTCACCTATCAAAATCTCATCCTGTGCATGATCAGGAAGCAGAAGTTATTCGGTGGGATGAAGGCTGTATGGATGATGATGACGGAAGAGTAACTCATTTAACCAAACAGAAGCCATGTTGCTGCTCATGCTATGACATGGAGTTTACAAAATGCTCAAAATATCCAATTAGAACCACAACTAAAAGTTCTCGTCACCATTGTAGCACTATTCCAGAAAGATCTGCACAGGTTGCTGCAGAATGTAGTACAGGAAGTTTGAATGATGAGATAGCGGATAAACCTAGTTCGAGTGATCAGTCTGAATCCGAGTTTGGTTATCGTCCAGTTCAGCATATGAGGACTGTACCTAGGGACAGTGATGTGCCTTCAACTACTCTAAGAGAGGAAGAACTTCTGGATGCTTTGCTATTGTTGTATCACATAGGTGTTGCACCAAACTTTAAGCAGGCCTCATATTACATGTCTCATCAGTCACAATCGATATCTCTCCTTGAAGAGACTGATAAACAAATACGAGAACGATCTTGCAGTGAGCAACTAAAGCGTCTGAAGGAGACTCGTAATAACTACCGTGAAGAAGTTATTGATTGTGTCCGACATTGTGCTTGGTTGACTGCTTTCATGTCTTGCTCAATATCAGTCCTGGTGCAGTACAGGGAGTATTTAGCAGCTTTTGAGAACAATGAAGCGGCCAAACAGAGGATGCCGAAGGCATTGTTGTCTGCATTTGATAACCGATCTTGGATTCCTGTTACAAACATTCTTCTGCGGCTATGCAAGGGTTCTGGATTTGGTTCTTCAAAGCATGGAGAATCATCATCATCCTCAGTTATTTTTCAGAGACTGCTCCGTGAAGCTTGCATCAATGATGAAGAGTTGTTCTCAGCTTTTCTCAATCGTCTATTTAACACTCTCAGCTGGACAATGACTGAATTCTCAGTTTCCATCCGAGAAATGCAAGAAAAATATCAGGTGTTGGAGTTCCAGCAGAGGAAATGTTGTGTTATATTTGATCTCTCGTGTAATCTTGCGAGGGTGTTGGAATTCTGTACCCATGAGATCCCTCAAGCATTCCTCTCGGGGCCTGATACAAACCTTCGAAGGCTGACTGAGTTGATTGTCTTCATTCTGAACAATACAACTTCAGCGGCAGATGCTGAGTTTTTTGACTTGTCATTGAGACGGCATGGTCAATCTTCAGAGAAAGTAAACAGAGGCATGATATTAGCCCCTCTAGTAGGGATCATTGTGAATTTGTTGGATGCTAGTTCGGAGTCGGAATTCAAGGAACAGAATGATGTTTTGGGTGTGTTTGCAAGCATGGATTGTCCTGAAACCGTTCATTATGGTTTTCAGTACATGTTAGAGTATAACTGGGCTACATCGATTAGAGGAGAAGCATATGTTCCTAAACTTTGTCAGCTGGAGAACTTCTTGAGCCTCCTCATCACCTATACCGAGTCACAGAAGAACGAGGAGCTGCAAAGTGGAGAAACAGATGCAGACGACGGGATGTGCTGCATATGTTATGCTTGCGAAGCAGATGCAGAGTTTTCACCATGTTCCCATAGGTCTTGCTATGGTTGCATAACGAGGCATCTTTTAAATTGTCAAAGATGTTTCTTCTGCAATGCAACAGTCTTGGAAGTAGTCAGGAACATGGAAAAGACAGATCAAAGATAA

Protein:   MAEDSLRIGGLSSGLAVILNNEDGKENLSKTRLVSSCDDFGHQSVERALEFVFGLPSKSLDPLSGPIDGNLIRSIIKNYVRSDSDSLVSSRDGVAVVDNGSGPDVVGLEEFSICGEIKIIKSPLLLESLALFSSARANVCVWKGKWMYEVILETSGIQQLGWATISCPFTDHKGVGDADDSYAFDGRRVSKWNKEAEPYGQSWVVGDVIGCCIDLDHDEISFYRNGVALGLAFSGIRKMGPGFGYYPAVSLSQGERCELNFGARPFKYPIDGYLPLQSPPTCSSFAKQLLDCLSRLLDMQSVERAEHSSVEKLRRLKRTFVQNLLLKNRGADRNMPPPGTSSNSVLVSLYTVILHFLSEGFGMGNICGWLTNCDSNARDIGFLHRGGHQSFPIGLFLKNDPHRADISRLGGSFSHLSKSHPVHDQEAEVIRWDEGCMDDDDGRVTHLTKQKPCCCSCYDMEFTKCSKYPIRTTTKSSRHHCSTIPERSAQVAAECSTGSLNDEIADKPSSSDQSESEFGYRPVQHMRTVPRDSDVPSTTLREEELLDALLLLYHIGVAPNFKQASYYMSHQSQSISLLEETDKQIRERSCSEQLKRLKETRNNYREEVIDCVRHCAWLTAFMSCSISVLVQYREYLAAFENNEAAKQRMPKALLSAFDNRSWIPVTNILLRLCKGSGFGSSKHGESSSSSVIFQRLLREACINDEELFSAFLNRLFNTLSWTMTEFSVSIREMQEKYQVLEFQQRKCCVIFDLSCNLARVLEFCTHEIPQAFLSGPDTNLRRLTELIVFILNNTTSAADAEFFDLSLRRHGQSSEKVNRGMILAPLVGIIVNLLDASSESEFKEQNDVLGVFASMDCPETVHYGFQYMLEYNWATSIRGEAYVPKLCQLENFLSLLITYTESQKNEELQSGETDADDGMCCICYACEADAEFSPCSHRSCYGCITRHLLNCQRCFFCNATVLEVVRNMEKTDQR